Wishlist Science
From openSUSE
| Package Wishlists: Base - Development - Drivers - Education - Emulation - Eyecandy - Games - GNOME - KDE - Mobile Computing - Multimedia - Network - Productivity - Science - Various - Dropped Packages |
A
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| ARPACK | Arnoldi package library | BSD-like | Scientists | Similar LAPACK, but using the Arnoldi technique to solve eigenproblems. Exists also in a parallel version (PARPACK) |
| Asymptote | Vector Graphics Drawing Program | GPL | Scientists | Asymptote is a powerful descriptive vector graphics language that provides a natural coordinate-based framework for technical drawing. |
| ATLAS | Automatically Tuned Linear Algebra Software | BSD-like | Scientists | Contains optimized BLAS and some LAPACK routines. Atlas however has to be compiled on the computer where it is used, because of the self-tunig during the build process. So, really nice would be an application that builds ATLAS, puts the library into a rpm, and installs it.
Feel free to download a version from home:brcha repository. Keep in mind that only x86_64 version is correct. The i586 version is optimized for the openSUSE's build farm which has SSE3 enabled computers so it probably will not work on most computers. The best way (until I fix that issue and after that too) is to download the src.rpm and rebuild it yourself (rpmbuild --recompile libatlas3-3.8.0-3.1.src.rpm) since then it will be optimized for your own CPU. |
B
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| Bibus-biblio | Bibus bibliographic software | GPL | Science Writers | Bibus is a bibliographic database.It can directly insert references in OpenOffice.org and MS Word and generate the bibliographic index. |
C
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| CFITSIO | FITS File Subroutine Library | ? Free Open Source (BSD-Like) | Astronomist | CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexible Image Transport System) data format. |
E
| Package | Description | License | wanted by | remark | |
|---|---|---|---|---|---|
| EMBOSS | The European Molecular Biology Open Software Suite | GPL | Scientists | Widely used in the Scientific Community. | |
| Engauge Digitizer | Digitalize plots to obtain x-y files | GPL | Scientists | Alternative is g3data | |
| ESO-MIDAS | Astronomical image processing and data analysis system. | GPL | Scientists/Astronomers | The ESO-MIDAS system provides general tools for image processing and data reduction with emphasis on astronomical applications including imaging and special reduction packages for ESO instrumentation at La Silla and the VLT at Paranal. In addition it contains applications packages for stellar and surface photometry, image sharpening and decomposition, statistics and various others. ESO-MIDAS is available under the GNU General Public License (GPL), and can be implemented on VMS, OpenVMS and UNIX (Linux) systems.
| |
| Extrema | Visualization and data analysis tool | GPL | Scientists / Engineers | Extrema is a powerful visualization and data analysis tool that enables researchers to quickly distill their large, complex data sets into meaningful information. Its flexibility, sophistication, and power allow you to easily develop your own commands and create highly customized graphs. |
F
| Package | Description | License | wanted by | remark | |
|---|---|---|---|---|---|
| fityk | fityk is a program for nonlinear fitting of analytical functions | GPL | Scientists/Engineers |
Please try out the package at http://build.opensuse.org/project/show?project=home%3Ajdpipe | |
| Framewave | Framewave is a set of optimized libraries for vector,signal and image processing by AMD | Apache | Scientists/Engineers | Similiar to Intel Performance Primitives | |
| FreeMat | FreeMat is an environment for engineering and scientific prototyping and data processing. | GPL | Mathematicians/Scientists/Engineers | Similar to Mathworks MATLAB. |
G
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| g3data | Digitalize plots to obtain x-y files | GPL | Scientists | See also Engauge Digitizer |
| GAP | Groups, Algorithms, Programming | GPL | Mathematicians, Students | GAP is a free system for computational discrete mathematics, in particular group theory. |
| GChemPaint | 2D chemical drawing program | GPL | Scientists | chemical drawing program. |
| GDL | GNU Data Language | GPL | Scientists/Engineers | Visual data-analysis software widely used is research. It fully supports netCDF files. It provides a python module and has an interface to python |
| gEDA | Suite of Electronic Design Automation tools | GPL | Electronics Engineers (undergraduates and working) | The gEDA project is working on producing a full GPL'd suite of Electronic Design Automation (EDA) tools. These tools are used for electrical circuit design, schematic capture, simulation, prototyping, and production.
Packages available at http://software.opensuse.org/download/science/ |
| GMT Generic Mapping Tools | Very powerful system to do geo referenced and other graphical plots | GPL | Many scientists, lots of other users needing script generated graphics |
Packages available at http://software.opensuse.org/download/Application:/Geo/ |
| GRASS GIS version 6.x | Geographic Information System | GPL | Scientists Public authorities | Geospatial data management and analysis, image processing, graphics/maps production, spatial modeling, and visualization.
Packages available at http://software.opensuse.org/download/Application:/Geo/ |
| gretl | Gnu Regression, Econometrics and Time-series Library | GPL | Students Economists | It is an open-source software application for compiling and interpreting data for econometrics. Though powerful, it's also simple to use while doing regression or time-series analysis. Uses gnuplot for drawing. |
| gvSIG | Tool oriented to manage geographic information | GPL | Scientists Engineers | gvSIG is characterized by a user-friendly interface, with a quick access to the most usual raster and vector formats. In the same view it includes local as well as remote data through a WMS or WFS source. |
| GRAMPS | GRAMPS (Genealogical Research and Analysis Management Programming System) | GPL | Scientists users | GRAMPS helps you track your family tree. It allows you to store, edit, and research genealogical data. (Note: Packages are available at http://download.opensuse.org/repositories/home:/rbos/openSUSE_10.2/ (in the noarch folder), kindly contributed by Richard Bos. They work fine, SFAICS.) |
H
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| HEALPix | Hierarchical Equal Area isoLatitude Pixelization of a sphere | GPL | Cosmologists | C/C++/Fortran library and tools for Cosmic Microwave Background experiments data analysis. |
I
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| IT++ | Communications Engineering package | GPL | IT++ is a C++ library of mathematical, signal processing, speech processing, and communications classes and functions.
Package available at http://software.opensuse.org/download/science/ |
J
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| JabRef | Java GUI for BibTeX databases | GPL | Scientists | JabRef is a graphical frontend to manage BibTeX databases, the standard LaTeX bibliography reference format. JabRef is build to be platform independant (requires Java 1.4.2 or newer). |
| JGR | Java GUI for R | GPL | Scientists | JGR (speak 'Jaguar') is a universal and unified Graphical User Interface for R (it actually abbreviates Java Gui for R). |
K
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| Kicad | Circuit Design | GPL | Scientists | Kicad is an open source (GPL) software for the creation of electronic schematic diagrams and printed circuit board artwork. Packages available at http://software.opensuse.org/download/science/ |
| Kradview | The free DICOM viewer for Linux | GPL | Education, Scientists | Kradview is a GPLed viewer of images obtained for some different sources: X-ray, NMR and DICOM-compatible imaging devices that runs on free operating systems. Its aim is a easy to use DICOM viewer with instant rendering of images, no matter the size and the zoom of the DICOM image. It covers the "let's see the the X-ray image" need of the medical professional. For DICOM Medical Image Samples see also http://www.barre.nom.fr/medical/samples/ |
| Ktechlab | Simulator | GPL | Education, Scientists | KTechlab provides a powerful environment for electronic circuits and microcontrollers. This includes simulation of a variety of components (logic, integrated, linear, nonlinear and reactive), simulation and debugging of PIC microcontrollers via gpsim
Lots of dependencies |
| KBibTeX | BibTeX Management | GPL | Education, Scientists | KBibTeX is a BibTeX editor for KDE to edit bibliographies used with LaTeX. Features include comfortable input masks, starting web queries (e. g. Google or PubMed) and exporting to PDF, PostScript, RTF and XML/HTML. As KBibTeX is using KDE's KParts technology, KBibTeX can be embedded into Kile or Konqueror. |
L
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| LAPACK95 | Linear Algabra Package | BSD-like | Scientists Engineers | Fortran 95 interface to LAPACK |
M
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| MAXIMA | Symbolic algebra system | GPL | Scientists Engineers | Maxima is a full symbolic computation program. It is full featured doing symbolic manipulation of polynomials, matrices, rational functions, integration, Todd-coxeter, graphing, bigfloats.
Package available at http://software.opensuse.org/download/science/ |
N
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| NAMD | Highly scalable high performance molecular dynamics package. | UIUC license | biochemists | Free for academic use and internal business use only. Check out VMD from the same group |
| NumPy | Python numerics package | OSI-Approved Open Source | Scientists Engineers | Adds a fast array feature and many numerics routines (like FFTs, linear algebra) to Python. Needed for SciPy.
Packages available at http://software.opensuse.org/download/science/ |
O
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| Octave | GNU Octave is a high-level language, primarily intended for numerical computations | GPL | Scientists, Engineers | GNU Octave is a high-level language, primarily intended for numerical computations. It provides a convenient command line interface for solving linear and nonlinear problems numerically, and for performing other numerical experiments using a language that is mostly compatible with Matlab. Packages available at http://software.opensuse.org/download/science/ |
| Octave-forge | Function files for Octave | GPL | Octave-forge is a library of functions that provides MATLAB compatibility to Octave. | |
| octaviz | 3D Visualization System for Octave | GPL | Scientists, Engineers | Octaviz is a visualization system for Octave. It is a wrapper that makes all VTK classes accessible from within Octave using the same object-oriented syntax as in C++ or Python. Octaviz also provides high-level functions for 2D and 3D visualization. Using those functions, most common visualization tasks (3D surface plots, contour plots, meshes etc) can be accomplished without any knowledge about VTK. |
| OpenCascade | OpenCASACADE is a CAD-System for 3D modeling & numerical simulation | LGPL-like | Engineers Scientists Students | Open CASCADE is a powerful CAD/CAM/CAE kernel and development platform for 3D modeling applications. It consists of reusable C++ object libraries and a set of development tools that are available in Open Source. |
| OpenCV | Open Computer Vision | GPL | Roboticists and Vision developers | Computer vision development library. |
| OpenDX | 3D scientific visualization software | GPL | Scientists Students | OpenDX is a package for visualization of 3D data. It features surface plots, volume plots, 3D-plots of functions and visualization of time-dependent (4D) data. It is programmable via a visual interface by connecting various functional modules for visualizing and interactively or non-interactively manipulating and browsing data. In Factory it exists as package dx*. Also available at http://software.opensuse.org/download/home:/lmich/ |
| OpenFOAM | The open source CFD Toolbox | GPL | Scientists Students | The OpenFOAM (Open Field Operation and Manipulation) CFD Toolbox can simulate anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics, electromagnetics and the pricing of financial options. Based on finite diff. methods. Expandable libraries. Case management and data vis. included. |
| Open MPI | Open Source High Performance Computing | BSD | Scientists Computer Scientists Chemists | Open MPI is a project combining technologies and resources from several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in order to build the best MPI library available. A completely new MPI-2 compliant implementation, Open MPI offers advantages for system and software vendors, application developers and computer science researchers. Test packages available at http://repos.opensuse.org/home:/ferichter/ |
| Orsa - xorsa | Open Source Celestial Mechanics computations | GPL | Scientists Astrophysicists | ORSA is an interactive tool for scientific grade Celestial Mechanics computations. Asteroids, comets, artificial satellites, Solar and extra-Solar planetary systems can be accurately reproduced, simulated, and analyzed. |
P
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| Process Visualization Browser | HMI(Human Machine Interface) & SCADA(Supervisory Control and Data Acquisition) Software | GPL | Process & Electrical Engineers | SCADA (supervisory control and data acquisition) is a category of software application program for process control, the gathering of data in real time from remote locations in order to control equipment and conditions. SCADA is used in power plants as well as in oil and gas refining, telecommunications, transportation, and water and waste control. The hardware gathers and feeds data into a computer that has SCADA software installed. The computer then processes this data and presents it in a timely manner ( HMI ). SCADA also records and logs all events into a file stored on a hard disk or sends them to a printer. SCADA warns when conditions become hazardous by sounding alarms. |
Q
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| QtiPlot | Data analysis and scientific plotting | GPL | Scientists | A Packman package exists |
| QuantumGIS | GIS Gui for Grass and other formats | GPL | Scientists, Land Managment, Engineers |
Package available at http://software.opensuse.org/Application:/Geo/ |
| Qucs | Qucs provides a GUI based on Qt for setting up electronical circuits and a simulator, which is able to simulate the small- and large signal and noise behaviour of microwave circuits. Pure digital simulations can be performed via VHDL. The results can be shown on a presentation page in different formats (rectangular, polar, smith, tabular, 3D rectangular etc.). | GPL | Scientists, Electronic , Engineers | Depends on Qt
Package available at http://software.opensuse.org/download/science/) |
R
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| ROOT | An Object-Oriented Data Analysis Framework | GPL | Scientists | ROOT is a data analysis framework used mainly by the physics community but it has also been applied to the business sector. |
| RLaBplus | An open-source scripting environment for scientific computations | GPL | Scientists/Researchers | Rlab is a very high level language intended to provide fast prototyping and program development, as well as easy data-visualization, and processing.RLaBplus is another step in an evolution of the original Rlab. |
S
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| SALOME | Platform for Pre and Post-Processing | LGPL | Engineers Scientists | Generic platform for Pre and Post-Processing for numerical simulation. |
| ScaLAPACK | Parallized version of LAPACK | GPL | Scientists | For those who have a multicore computer and want to distribute eigenproblems. |
| SciGraphica | Data Analysis | GPL | Scientists Engineers | SciGraphica is a scientific application for data analysis and technical graphics. It pretends to be a clone of the popular commercial (and expensive) application "Microcal Origin". It fully supplies plotting features for 2D, 3D and polar charts. The aim is to obtain a fully-featured, cross-plattform, user-friendly, self-growing scientific application. |
| SAGE | Symbolic Calculation | GPL | Scientists | SAGE is an Open Source Mathematics Software which aims to be a viable free open source alternative to Magma, Maple, Mathematica, and Matlab |
| SciPy | Python routines for mathematics, science, and engineering | Open-Source | Engineers and Scientists | Gives Python capabilites and functions similar to Matlab.
Packages available at http://software.opensuse.org/download/science/ |
| SPARSKIT | Sparse matrix calculation | LGPL | Scientists Engineers | Sparskit can be regarded as augmentation to Lapack, which has only a limited support of sparse matrixes. |
T
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| TKGate | Digital circuit simulator | GPL | Education | TkGate is a event driven digital circuit simulator with a tcl/tk-based graphical editor. |
V
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| VTK | Visulation toolkit | GPL | Scientists | The Visualization ToolKit (VTK) is an open source, freely available software system for 3D computer graphics, image processing, and visualization used by thousands of researchers and developers around the world. VTK consists of a C++ class library, and several interpreted interface layers including Tcl/Tk, Java, and Python. |
W
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| wxMAXIMA | GUI for MAXIMA | GPL | Scientists Engineers | wxMaxima is a wxWidgets GUI for the computer algebra system MAXIMA.
Package available at http://software.opensuse.org/download/science/ |
X
| Package | Description | License | wanted by | remark |
|---|---|---|---|---|
| XDrawChem | 2D chemical drawing program | GPL | Scientists Chemical Engineers | chemical drawing program. |
| Package Wishlists: Base - Development - Drivers - Education - Emulation - Eyecandy - Games - GNOME - KDE - Mobile Computing - Multimedia - Network - Productivity - Science - Various - Dropped Packages |

